datatypes¶
This section is auto-generated from the help text for the parsec command
datatypes
.
get_datatypes
command¶
Usage:
parsec datatypes get_datatypes [OPTIONS]
Help
Get the list of all installed datatypes.
Output
- A list of datatype names.
For example:
[u'snpmatrix', u'snptest', u'tabular', u'taxonomy', u'twobit', u'txt', u'vcf', u'wig', u'xgmml', u'xml']
Options:
--extension_only TEXT
--upload_only TEXT
-h, --help Show this message and exit.
get_sniffers
command¶
Usage:
parsec datatypes get_sniffers [OPTIONS]
Help
Get the list of all installed sniffers.
Output
- A list of sniffer names.
For example:
[u'galaxy.datatypes.tabular:Vcf', u'galaxy.datatypes.binary:TwoBit', u'galaxy.datatypes.binary:Bam', u'galaxy.datatypes.binary:Sff', u'galaxy.datatypes.xml:Phyloxml', u'galaxy.datatypes.xml:GenericXml', u'galaxy.datatypes.sequence:Maf', u'galaxy.datatypes.sequence:Lav', u'galaxy.datatypes.sequence:csFasta']
Options:
-h, --help Show this message and exit.